[miso-users] apparent errors in misopy test_miso.py file locations

[David Quigley]

Hi folks,

I just installed the latest misopy and found two errors in the test_miso script that are caused by file locations errors. Presumably the directory structure changed and the test script didn't follow along. I've corrected them below to point out the locations:

        self.test_sam_filename = os.path.join(self.tests_data_dir,
#                                              "sam-data",
                                              "c2c12.Atp2b1.sam")

# First index the GFF of interest
#        gff_filename = os.path.join(self.gff_events_dir, "mm9", "genes", "Atp2b1.mm9.gff")
        gff_filename = os.path.join(self.gff_events_dir, "Atp2b1.mm9.gff") 

Best regards,

David Quigley