[OWW-Discuss] Announcing PDBWiki

[John Cumbers]

sounds good to me,
John

On Wed, Apr 9, 2008 at 9:17 PM, Lorrie LeJeune <lorrielejeune at gmail.com>
wrote:

> I agree with Jason. It makes more sense to add the OWW SC to the existing
> list of supporters on the letter than to draft a new one.
> --Lorrie
>
>
>
> On Wed, Apr 9, 2008 at 9:10 PM, Jason Kelly <jasonk at mit.edu> wrote:
>
> > Noticed that they've already got a letter up here:
> >
> > http://ecoliwiki.net/colipedia/index.php/Draft_letter_to_Science_about_wikifying_genome_information
> >
> > Maybe we could bring it up at the SC meeting and if people are OK with
> > it, the SC could sign off on the letter above (they are submitting it
> > on friday).  I personally think that it has more weight if it's signed
> > by a volunteer group of scientists that collaborate and share on a
> > wiki, rather than from folks running a wiki ;)
> >
> > thanks,
> > jason
> >
> > On Wed, Apr 9, 2008 at 8:46 PM, John Cumbers <johncumbers at gmail.com>
> > wrote:
> > > Hi Dan,
> > >  This sounds like something we should be supporting, Lorrie, please
> > could
> > > you pen a letter of support?  this could either be from you as
> > Managing
> > > Director of OWW, or from the SC,
> > > cheers,
> > > John
> > >
> > >
> > >
> > >  On Wed, Apr 9, 2008 at 4:39 AM, Dan Bolser <dan.bolser at gmail.com>
> > wrote:
> > > >
> > > > On 08/04/2008, Austin Che <austin at csail.mit.edu> wrote:
> > > >  > "Dan Bolser" <dan.bolser at gmail.com> wrote:
> > > >  >
> > > >  >  > Dear OWW,
> > > >  >  >
> > > >  >  > Following the recent discussions about the proposal to
> > 'wikify'
> > > >  >  > GenBank, I would like to ask for feedback on our 'PDBWiki'
> > project.
> > > >  >  >
> > > >  >  > PDBWiki is basically an open experiment towards a wiki-style
> > system
> > > >  >  > based on the Protein Data Bank (PDB). There is one page per
> > PDB
> > > entry
> > > >  >  > where users can add annotations but editing the source data is
> > > >  >  > currently not allowed.
> > > >  >
> > > >  >
> > > >  >     pdbwiki sounds great!
> > > >  >
> > > >  >     I also just saw this:
> > > >  >
> > >
> > http://ecoliwiki.net/colipedia/index.php/Draft_letter_to_Science_about_wikifying_genome_information
> > > >  >     Should OWW/pdbwiki sign on to the letter?
> > > >
> > > >
> > > > The letter is interesting, and makes some very good points. I think
> > it
> > > >  would be a shame for OWW not to get on board with this kind of
> > > >  'awareness' exercise. Currently there are a lot of opinions,
> > > >  expectations and prejudices surrounding the whole idea of
> > 'community
> > > >  annotation'. The more scientists who have hands on experience with
> > > >  wiki (for example), the better we will be able to move towards
> > > >  improved database systems in biology and bioinformatics.
> > > >
> > > >  For us the idea was to start small and to keep things practical.
> > > >  PDBWiki simply provides a system whereby free-text community
> > > >  annotation can be applied to each database entry. It will be
> > > >  interesting to see how this approach pans out.
> > > >
> > > >
> > > >  Dan.
> > > >
> > > >
> > > >
> > > >  --
> > > >  BiO.CC
> > > >
> > > >
> > > >
> > > > _______________________________________________
> > > > OpenWetWare Discussion Mailing List
> > > > discuss at openwetware.org
> > > > http://mailman.mit.edu/mailman/listinfo/oww-discuss
> > > >
> > >
> > >
> > >
> > > --
> > >
> > > John Cumbers, Graduate Student
> > > Molecular Biology, Cell Biology, and Biochemistry
> > > Biology and Medicine, Brown University, Box G-W
> > > Providence, Rhode Island, 02912, USA
> > >  Tel USA: +1 401 523 8190, Fax: +1 401 863-2166, UK to USA: 0207 617
> > 7824
> > >
> > > Delivery address: Brown University (EEB) Biomed Stock Room
> > > 34 OLIVE ST, Providence, RI 02912
> > >
> > > _______________________________________________
> > >  OpenWetWare Discussion Mailing List
> > >  discuss at openwetware.org
> > >  http://mailman.mit.edu/mailman/listinfo/oww-discuss
> > >
> > >
> >
>
>


-- 
John Cumbers, Graduate Student
Molecular Biology, Cell Biology, and Biochemistry
Biology and Medicine, Brown University, Box G-W
Providence, Rhode Island, 02912, USA
Tel USA: +1 401 523 8190, Fax: +1 401 863-2166, UK to USA: 0207 617 7824

Delivery address: Brown University (EEB) Biomed Stock Room
34 OLIVE ST, Providence, RI 02912
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mailman.mit.edu/pipermail/oww-discuss/attachments/20080410/f01cf31b/attachment.htm