[miso-users] help
sudeep dureja
durejasudeep at yahoo.com
Wed Jun 5 06:18:10 EDT 2013
Dear MISO users,
Warm Greetings !!
I am Sudeep from India. Recently I have been working on alternative splicing.
My question is regarding extraction of genes which show more than two isoforms.
Summary about my project:
#1 Samples : 2 (case, control)
#2 Generated BAM files using Tophat.
#3 After comparison step, am stuck with filtering step. Error : More than two isoforms.
Please suggest me parameters values (parameters; --bayes-factor, --delta-psi) and any way to use these file to get filter genes and sashimi plot.
Kind Regards,
Sudeep
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