[miso-users] miso error

[mykhwab]

Hi

after running this command

      python index_gff.py --index SE.gff3 indexed_SE_events/

I have got thtis error..the program is skipping some genes. Why is this so,
how can i fix it?




Cannot make gene out of AT5G66890
WARNING: AT5G66900 does not have at least two mRNA/transcript entries with
exons. Skipping over...
Cannot make gene out of AT5G66900
WARNING: AT5G66910 does not have at least two mRNA/transcript entries with
exons. Skipping over...
Cannot make gene out of AT5G66910
WARNING: AT5G66920 does not have at least two mRNA/transcript entries with
exons. Skipping over...
Cannot make gene out of AT5G66920
WARNING: AT5G66940 does not have at least two mRNA/transcript entries with
exons. Skipping over...
Cannot make gene out of AT5G66940
WARNING: AT5G66950 does not have at least two mRNA/transcript entries with
exons. Skipping over...
Cannot make gene out of AT5G66950
WARNING: AT5G66960 does not have at least two mRNA/transcript entries with
exons. Skipping over...
Cannot make gene out of AT5G66960
WARNING: AT5G66970 does not have at least two mRNA/transcript entries with
exons. Skipping over...



Regards
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