[CSBi-HPC] how to run jobs in the cluster?

[edelman@math.mit.edu]

Is this a good time to tell people about
Matlab star-p?

> 
> Hi,
> 
> I'm wondering how to run multiple matlab jobs on the CSBi clusters. Do 
> you simply starting a few matlab enviroments and run jobs separately in 
> each matlab enviroment, or user "llsubmit" to submit the matlab jobs?
> 
> Based on the knowledge I got from my google search, I wrote the 
> following myjob.cmb and used "llsubmit myjob.cmd" to submit the job. 
> However it didn't work. All I got is the following:
> **********************************
> llsubmit: Processed command file through Submit Filter: 
> "/opt/nebiogrid/loadl/util/submit-filter.pl".
> llsubmit: 2512-354 The ENFORCE_RESOURCE_SUBMISSION keyword is true, 
> ConsumableCpus is required in the job's "resources" keyword.
> llsubmit: 2512-051 This job has not been submitted to LoadLeveler.
> ****************************************************
> 
> Could someone share his or her knowledge and help me on this problem?
> 
> Thanks a lot!!
> 
> Alan
> 
> P.S. myjob.cmb:
> 
> # @ job_type = parallel
> # @ environment  = LL_JOB=TRUE
> # @ notification = always
> #     Notification value should be set to either:
> #                  always - User notified when job begins, ends, or fails
> #                  complete - User notified when job ends
> # @ notify_user  = alanqi at csail.mit.edu
> #     Email address to which notification is sent to.
> # @ queue
> #
> # Submit Matlab M-file myjob.m as batch file to Matlab and send any
> # terminal output to file named myjob.out.
> 
> matlab -nodesktop -r "benchmarktime;exit" > myjob2.out
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