[CSBi-HPC] how to run jobs in the cluster?

[Karen Sachs]

I can't understand what is wrong, but I can suggest compiling your matlab
code..it might make things run smoother (doesn't require license files and
so on).

I can help with compiling if you need it.

Good luck!
Karen

On Fri, 18 Feb 2005, Alan Qi wrote:

> Hi,
>
> I'm wondering how to run multiple matlab jobs on the CSBi clusters. Do
> you simply starting a few matlab enviroments and run jobs separately in
> each matlab enviroment, or user "llsubmit" to submit the matlab jobs?
>
> Based on the knowledge I got from my google search, I wrote the
> following myjob.cmb and used "llsubmit myjob.cmd" to submit the job.
> However it didn't work. All I got is the following:
> **********************************
> llsubmit: Processed command file through Submit Filter:
> "/opt/nebiogrid/loadl/util/submit-filter.pl".
> llsubmit: 2512-354 The ENFORCE_RESOURCE_SUBMISSION keyword is true,
> ConsumableCpus is required in the job's "resources" keyword.
> llsubmit: 2512-051 This job has not been submitted to LoadLeveler.
> ****************************************************
>
> Could someone share his or her knowledge and help me on this problem?
>
> Thanks a lot!!
>
> Alan
>
> P.S. myjob.cmb:
>
> # @ job_type = parallel
> # @ environment  = LL_JOB=TRUE
> # @ notification = always
> #     Notification value should be set to either:
> #                  always - User notified when job begins, ends, or fails
> #                  complete - User notified when job ends
> # @ notify_user  = alanqi at csail.mit.edu
> #     Email address to which notification is sent to.
> # @ queue
> #
> # Submit Matlab M-file myjob.m as batch file to Matlab and send any
> # terminal output to file named myjob.out.
>
> matlab -nodesktop -r "benchmarktime;exit" > myjob2.out
> _______________________________________________
> CSBi-HPC-users mailing list
> CSBi-HPC-users at mit.edu
> http://mailman.mit.edu/mailman/listinfo/csbi-hpc-users
>