[StarCluster] Help needed with running mpich2 plugin using starcluster

Justin Riley jtriley at MIT.EDU
Wed Feb 22 11:51:02 EST 2012


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Hi Subbarao,

Which AMI are you using? This error usually occurs because you're
using an AMI that does not allow root logins.

In general you should use either the StarCluster supported AMIs or an
AMI based on the StarCluster supported AMIs. Have a look at the
following doc on how to customize the StarCluster supported AMIs:

http://web.mit.edu/star/cluster/docs/latest/manual/create_new_ami.html

Also, do you still have the 'crash report' that was generated when you
got this error? It would be useful to take a look at this as well if
it's still around....

~Justin

On 02/20/2012 02:57 PM, Subbarao Kota wrote:
> Hello, I received the below error when attempted to run the mpich2
> plugin on a 2-node cluster of t1.micro instance via starcluster.
> Can you please let me know what needs to be fixed or corrected?
> what additional information you will need to help.
> 
> Please advise. Thanks.
> 
> ====
> 
> StarCluster - (http://web.mit.edu/starcluster) (v. 0.93.1) Software
> Tools for Academics and Researchers (STAR) Please submit bug
> reports to starcluster at mit.edu
> 
>>>> Running plugin mpich2 Creating MPICH2 hosts file
> !!! ERROR - Error occurred while running plugin 'mpich2': Traceback
> (most recent call last): File
> "/Library/Python/2.7/site-packages/StarCluster-0.93.1-py2.7.egg/starcluster/cluster.py",
> line 1482, in run_plugin func(*args) File
> "/Library/Python/2.7/site-packages/StarCluster-0.93.1-py2.7.egg/starcluster/plugins/mpich2.py",
> line 33, in run mpich2_hosts =
> master.ssh.remote_file(self.MPICH2_HOSTS, 'w') File
> "/Library/Python/2.7/site-packages/StarCluster-0.93.1-py2.7.egg/starcluster/ssh.py",
> line 290, in remote_file rfile = self.sftp.open(file, mode) File
> "/Library/Python/2.7/site-packages/StarCluster-0.93.1-py2.7.egg/starcluster/ssh.py",
> line 180, in sftp self._sftp =
> paramiko.SFTPClient.from_transport(self.transport) File
> "build/bdist.macosx-10.7-intel/egg/paramiko/sftp_client.py", line
> 106, in from_transport return cls(chan) File
> "build/bdist.macosx-10.7-intel/egg/paramiko/sftp_client.py", line
> 87, in __init__ server_version = self._send_version() File
> "build/bdist.macosx-10.7-intel/egg/paramiko/sftp.py", line 108, in
> _send_version t, data = self._read_packet() File
> "build/bdist.macosx-10.7-intel/egg/paramiko/sftp.py", line 179, in
> _read_packet raise SFTPError('Garbage packet received') SFTPError:
> Garbage packet received 
> _______________________________________________ StarCluster mailing
> list StarCluster at mit.edu 
> http://mailman.mit.edu/mailman/listinfo/starcluster

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