[miso-users] Question about alternative event annotation files

[Yarden Katz]

Hi,

We do not have the mm10 annotation yet, but are working on generating it.  If you need it quickly, you can generate one by doing liftOver from mm9 to mm10 -- it's an imperfect solution but works for most cases.

  --Yarden




On Dec 17, 2012, at 7:11 AM, ÎâÎÄÎä wrote:

> Dear MISO group,
> This is Wenwu Wu, as postdoctoral fellow in Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences. My previous work was mainly on transcription factors SRF and MEF2 genes in mammals. And now, my focus is on RNA alternative splicing.
> Recently, I read your elegant work (Katz et al 2010) on RNA splicing. The work is very nice, and I believe it contributes significantly to the research of RNA splicing.
>  
> I noticed the mouse alternative event annotation files are based on mm9. Will you be, soon, to provide the annotation files for mm10?
>  
> Best
> yours
> Triple W
> ADDRESS: The Key Laboratory of Nutrition and Metabolism, Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Ch inese Academy of Sciences, Shanghai 200031.
>  
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