[miso-users] MISO error

[Rory Kirchner]

Hi Yamila,

I think MISO only supports Python 2, so if you swap over to that you should be all set.

Best,

Rory

> On Sep 6, 2016, at 4:25 AM, Yamila Nicole Torres Cleuren <Yamila.Cleuren at uib.no> wrote:
> 
> Hi everyone,
> 
> Has anyone encountered the following error when running miso on a 
> server? I have installed misopy following the instructions in the 
> official documentation, however it throws an error when trying to 
> execute one print from one of the libraries. Does anyone know if there 
> is a fix for this that does not involve a local installation?
> 
> Traceback (most recent call last):
>   File "/usr/local/bin/miso", line 9, in <module>
>     load_entry_point('misopy==0.5.3', 'console_scripts', 'miso')()
>   File 
> "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 
> 558, in load_entry_point
>     return get_distribution(dist).load_entry_point(group, name)
>   File 
> "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 
> 2682, in load_entry_point
>     return ep.load()
>   File 
> "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 
> 2355, in load
>     return self.resolve()
>   File 
> "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 
> 2361, in resolve
>     module = __import__(self.module_name, fromlist=['__name__'], 
> level=0)
>   File "/usr/local/lib/python3.5/site-packages/misopy/miso.py", line 62
>     print "MISO (Mixture of Isoforms model)"
>                                            ^
> SyntaxError: invalid syntax
> 
> Thanks!
> 
> -- 
> Yamila Torres Cleuren, PhD.
> Postdoctoral Fellow
> Valen Lab
> University of Bergen
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