[miso-users] Only pairs events generated from rnaseqlib/gff_make_annotation.py scripts

[Pengcheng Yang]

Hi all,

To run MISO, the alternative events were prepared using 
rnaseqlib/gff_make_annotation.py scripts. The output of this scripts is 
pairs of events, even for the multiple events more than two, such as 
more than two A5SS with the same 3' site. Currently, this scripts will 
give the combination of these events. Is there possible to output the 
events as multiple events?

 From the output of this scripts, it possible write a scripts to merge 
the events with the same one end site but different another site. But I 
think it is not a straightforward work. Like how to define one event 
group when multiple events interact together.

Thank you all and appreciate your information.

Best,
Pengcheng Yang