[miso-users] MISO installation question
Tony
TonyLiu at cuhk.edu.hk
Fri Feb 17 02:32:00 EST 2012
Dear Yarden Katz
Thanks for your effort for the MISO.
Recently, I encountered some problem when I want to install MISO. The
warning message is :
.Traceback (most recent call last):
File "/ifs-accel/liutao/software/src/MISO/misopy-0.4/misopy/run_miso.py",
line 588, in <module>
main()
File "/ifs-accel/liutao/software/src/MISO/misopy-0.4/misopy/run_miso.py",
line 542, in main
event_type=options.event_type)
File "/ifs-accel/liutao/software/src/MISO/misopy-0.4/misopy/run_miso.py",
line 378, in compute_gene_psi
lag=lag)
File
"/ifs-accel/apps/python/lib/python2.7/site-packages/misopy/miso_sampler.py",
line 243, in run_sampler
c_gene = py2c_gene(gene)
File
"/ifs-accel/apps/python/lib/python2.7/site-packages/misopy/py2c_gene.py",
line 21, in py2c_gene
c_gene = pysplicing.createGene(CMISO_exon_lens,
AttributeError: 'module' object has no attribute 'createGene'
The MISO version is 0.40 and I can not figure out the problem for a long
time.
Would you mind to point the problem? Thank you very much!
Regards,
Tony
--
*
Sincerely,
Tao Liu
Li Ka Shing Institute of Health Sciences
The Chinese University of Hong Kong
Tel.+852-37636015
*
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