[miso-users] [help]sashimi-plot IndexError: list index out of range?
zhenghui01@gmail.com
zhenghui01 at gmail.com
Mon Apr 23 15:16:52 EDT 2012
Hi All,
I finished running miso and was trying to plot using sashimi-plot, but got
the following error:
Traceback (most recent call last):
File "/ihome/zhenghui/miso/misopy/sashimi_plot/plot.py", line 283, in
<module>
main()
File "/ihome/zhenghui/miso/misopy/sashimi_plot/plot.py", line 279, in main
plot_event(event_name, pickle_dir, settings_filename, output_dir)
File "/ihome/zhenghui/miso/misopy/sashimi_plot/plot.py", line 133, in
plot_event
output_dir)
File
"/opt/python/2.7.2/lib/python2.7/site-packages/misopy/sashimi_plot/plot_utils/plot_gene.py",
line 654, in plot_density_from_file
plot_density(sashimi_obj, pickle_filename, event)
File
"/opt/python/2.7.2/lib/python2.7/site-packages/misopy/sashimi_plot/plot_utils/plot_gene.py",
line 199, in plot_density
color = colors[i]
IndexError: list index out of range
It seemed my miso output files loaded successfully. What could be the
possible source of the error? How should I fix it? Thank you!
Regards,
Jerry
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