[miso-users] (no subject)

[Yarden Katz]

This is now fixed in the fastmiso branch of GitHub.  Thanks, --Yarden




On Apr 12, 2012, at 2:50 AM, °¬Ù»Èã wrote:

> Dear Sir:
>          When I use¡± sashimi_plot/plot  --plot-posterior ¡° to draw the pictures ,I get follow wrong message:
> python plot.py --plot-posterior "test-data/miso-data/heartKOa/chr17/chr17:45816186:45816265:- at chr17:458159
> 12:45815950:- at chr17:45814875:45814965:-.miso" settings/sashimi_plot_settings.txt --output-dir test-plot/
> /usr/local/lib/python2.6/dist-packages/mpl_toolkits/__init__.py:2: UserWarning: Module dateutil was already imported from /usr/local/lib/python2.6/dist-packages/dateutil/__init__.pyc, but /usr/lib/pymodules/python2.6 is being added to sys.path
>   __import__('pkg_resources').declare_namespace(__name__)
> /usr/local/lib/python2.6/dist-packages/numpy/lib/npyio.py:1261: DeprecationWarning: The use of `skiprows` is deprecated, it will be removed in numpy 2.0.
> Please use `skip_header` instead.
>   DeprecationWarning)
> Traceback (most recent call last):
>   File "plot.py", line 282, in <module>
>     main()
>   File "plot.py", line 267, in main
>     plot_posterior(miso_filename, settings_filename, output_dir)
>   File "plot.py", line 195, in plot_posterior
>     if with_intervals != None:
> UnboundLocalError: local variable 'with_intervals' referenced before assignment
>  
>    Hope you can help me with the question. Thank you very much!
>  
> Best Wishes
> Amy AI
>  
> _______________________________________________
> miso-users mailing list
> miso-users at mit.edu
> http://mailman.mit.edu/mailman/listinfo/miso-users