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We used StarCluster to leverage spot instance pricing for bioinformatics. Many compute years over a weekend to chug through 40000 genes over 10 species.
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<div>From: Ramon Ramirez-Linan <rlinan@navteca.com> </div>
<div>Date: 7/14/21 8:01 AM (GMT-06:00) </div>
<div>To: Ed Gray <gray_ed@hotmail.com> </div>
<div>Cc: Ryan G <ngsbioinformatics@gmail.com>, "Marcey, David" <marcey@callutheran.edu>, starcluster@mit.edu
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<div>Subject: Re: [StarCluster] StarGenetics issues </div>
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<div dir="ltr">I was an active user of StarCluster for HPC on the agency I work for, but since AWS launched Pcluster I dont see the point and have switched to this other tool.
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<div>Ramon</div>
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<div dir="ltr" class="gmail_attr">On Tue, Jul 13, 2021 at 6:47 PM Ed Gray <<a href="mailto:gray_ed@hotmail.com">gray_ed@hotmail.com</a>> wrote:<br>
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<div dir="auto">oh man, finally a StarCluster group email and its unrelated.
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<div dir="auto">wow.</div>
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<div dir="auto">oh how the mighty have fallen.</div>
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<div>-------- Original message --------</div>
<div>From: Ryan G <<a href="mailto:ngsbioinformatics@gmail.com" target="_blank">ngsbioinformatics@gmail.com</a>>
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<div>Date: 7/13/21 5:40 PM (GMT-06:00) </div>
<div>To: "Marcey, David" <<a href="mailto:marcey@callutheran.edu" target="_blank">marcey@callutheran.edu</a>>
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<div>Cc: <a href="mailto:starcluster@mit.edu" target="_blank">starcluster@mit.edu</a>
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<div>Subject: Re: [StarCluster] StarGenetics issues </div>
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<div>To my knowledge, that tool is not related to starcluster. <br>
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<div dir="ltr">Please excuse any typos -- Sent from my iPad</div>
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<blockquote type="cite">On Jul 13, 2021, at 3:24 PM, Marcey, David <<a href="mailto:marcey@callutheran.edu" target="_blank">marcey@callutheran.edu</a>> wrote:<br>
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<p class="MsoNormal"><span style="color:black">I’m using the Star Genetics Instructor page to create new SG problems (<a href="http://star-genetics-instructor.surge.sh/" target="_blank"><span style="color:rgb(5,99,193)">http://star-genetics-instructor.surge.sh/</span></a>).</span></p>
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<span style="color:black">The encrypt and save does not work for me if I use genes on different chromosomes. Firefox or Chrome browser.</span></p>
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<span style="color:black">I can encrypt and save if multiple genes are on different chromosomes.</span></p>
<p class="MsoNormal"><span style="color:black"> </span></p>
<p class="MsoNormal"><span style="color:black">However, I am getting anomalous results in simple dihybrid crosses with unlinked genes.</span></p>
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<span style="color:black">Any advice would be most appreciated!</span></p>
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<p class="MsoNormal"><span style="color:black">David Marcey</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">David J. Marcey</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">Fletcher Jones Professor of Developmental Biology</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">The Center for Active Learning</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">California Lutheran University</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">60 West Olsen Road., MC#3700</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">Thousand Oaks, CA 91360</span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black"><a href="mailto:marcey@callutheran.edu" target="_blank"><span style="color:blue">marcey@callutheran.edu</span></a></span></p>
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<p class="MsoNormal"><i><span style="font-size:14pt; font-family:Arial,sans-serif; color:black; background:white">he/him/his</span></i><span style="font-size:14pt; font-family:Arial,sans-serif; color:black; background:white"> </span><span style="font-size:14pt"></span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt; font-family:Arial,sans-serif; color:black">~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~</span></p>
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<div dir="ltr" style="font-size:12.8px"><font color="#073763"><font face="arial, helvetica, sans-serif"><span style="font-size:11pt">Ramon Ramirez-Linan | </span></font></font><b style="font-size:small; color:rgb(11,83,148)">
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<div dir="ltr" style="display:inline"><span style="font-weight:normal">Navteca | C: 301.789.9139 | </span></div>
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</b><span style="font-family:Calibri,sans-serif; font-size:11pt; color:rgb(7,55,99)"> </span><a href="https://twitter.com/RamonLinan" target="_blank" style="color:rgb(17,85,204); font-family:Calibri,sans-serif; font-size:11pt">@ramonlinan</a></div>
<div dir="ltr" style="font-size:12.8px"><span style="color:rgb(11,83,148); font-size:small">Emerging Technology, Innovation Solutions</span><br style="color:rgb(11,83,148); font-size:small">
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