<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=us-ascii">
<meta name="Generator" content="Microsoft Exchange Server">
<!-- converted from rtf -->
<style><!-- .EmailQuote { margin-left: 1pt; padding-left: 4pt; border-left: #800000 2px solid; } --></style>
</head>
<body>
<font face="Times New Roman, serif" size="4">
<div>Hi,</div>
<div>My name is Joe Shpungin.</div>
<div>I attempted to use StarCluster to launch a test cluster but the attempt failed with the following log. Could you please let me know what went wrong?</div>
<div><font face="Calibri, sans-serif" size="2"> </font></div>
<div><font color="#632423">---------- CRASH DETAILS ----------</font></div>
<div><font color="#632423">COMMAND: starcluster start CLUSTER1 --bid 0.20</font></div>
<div><font color="#632423">2012-10-04 17:06:20,903 PID: 23118 config.py:551 - DEBUG - Loading config</font></div>
<div><font color="#632423">2012-10-04 17:06:20,903 PID: 23118 config.py:118 - DEBUG - Loading file: /home/ec2-user/.starcluster/config</font></div>
<div><font color="#632423">2012-10-04 17:06:20,907 PID: 23118 awsutils.py:54 - DEBUG - creating self._conn w/ connection_authenticator kwargs = {'proxy_user': None, 'proxy_pass': None, 'proxy_port': None, 'proxy': None, 'is_secure': True, 'path': '/', 'region':
None, 'port': None}</font></div>
<div><font color="#632423">2012-10-04 17:06:21,025 PID: 23118 start.py:176 - INFO - Using default cluster template: smallcluster</font></div>
<div><font color="#632423">2012-10-04 17:06:21,025 PID: 23118 base.py:147 - WARNING - ************************************************************</font></div>
<div><font color="#632423">2012-10-04 17:06:21,029 PID: 23118 base.py:151 - WARNING - Waiting 5 seconds before continuing...</font></div>
<div><font color="#632423">2012-10-04 17:06:21,029 PID: 23118 base.py:152 - WARNING - Press CTRL-C to cancel...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,036 PID: 23118 cluster.py:1539 - INFO - Validating cluster template settings...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,376 PID: 23118 cluster.py:926 - DEBUG - Launch map: node001 (ami: ami-899d49e0, type: m1.small)...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,376 PID: 23118 cluster.py:1555 - INFO - Cluster template settings are valid</font></div>
<div><font color="#632423">2012-10-04 17:06:26,377 PID: 23118 cluster.py:1427 - INFO - Starting cluster...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,377 PID: 23118 cluster.py:952 - INFO - Launching a 2-node cluster...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,377 PID: 23118 cluster.py:926 - DEBUG - Launch map: node001 (ami: ami-899d49e0, type: m1.small)...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,378 PID: 23118 cluster.py:1004 - INFO - Launching master node (ami: ami-899d49e0, type: m1.small)...</font></div>
<div><font color="#632423">2012-10-04 17:06:26,442 PID: 23118 awsutils.py:165 - INFO - Creating security group @sc-CLUSTER1...</font></div>
<div><font color="#632423">2012-10-04 17:06:28,001 PID: 23118 cluster.py:772 - INFO - Reservation:r-26ce3940</font></div>
<div><font color="#632423">2012-10-04 17:06:28,002 PID: 23118 cluster.py:926 - DEBUG - Launch map: node001 (ami: ami-899d49e0, type: m1.small)...</font></div>
<div><font color="#632423">2012-10-04 17:06:28,002 PID: 23118 cluster.py:1024 - INFO - Launching node001 (ami: ami-899d49e0, type: m1.small)</font></div>
<div><font color="#632423">2012-10-04 17:06:28,151 PID: 23118 cluster.py:772 - INFO - SpotInstanceRequest:sir-8fd42811</font></div>
<div><font color="#632423">2012-10-04 17:06:28,151 PID: 23118 cluster.py:1235 - INFO - Waiting for cluster to come up... (updating every 30s)</font></div>
<div><font color="#632423">2012-10-04 17:06:28,543 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {}</font></div>
<div><font color="#632423">2012-10-04 17:06:28,543 PID: 23118 cluster.py:672 - DEBUG - adding node i-a5a334d8 to self._nodes list</font></div>
<div><font color="#632423">2012-10-04 17:06:29,877 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>]</font></div>
<div><font color="#632423">2012-10-04 17:06:29,877 PID: 23118 cluster.py:1193 - INFO - Waiting for all nodes to be in a 'running' state...</font></div>
<div><font color="#632423">2012-10-04 17:06:29,963 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {u'i-a5a334d8': <Node: master (i-a5a334d8)>}</font></div>
<div><font color="#632423">2012-10-04 17:06:29,963 PID: 23118 cluster.py:667 - DEBUG - updating existing node i-a5a334d8 in self._nodes</font></div>
<div><font color="#632423">2012-10-04 17:06:29,964 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>]</font></div>
<div><font color="#632423">2012-10-04 17:07:00,172 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {u'i-a5a334d8': <Node: master (i-a5a334d8)>}</font></div>
<div><font color="#632423">2012-10-04 17:07:00,173 PID: 23118 cluster.py:667 - DEBUG - updating existing node i-a5a334d8 in self._nodes</font></div>
<div><font color="#632423">2012-10-04 17:07:00,173 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>]</font></div>
<div><font color="#632423">2012-10-04 17:07:00,173 PID: 23118 cluster.py:1211 - INFO - Waiting for SSH to come up on all nodes...</font></div>
<div><font color="#632423">2012-10-04 17:07:00,254 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {u'i-a5a334d8': <Node: master (i-a5a334d8)>}</font></div>
<div><font color="#632423">2012-10-04 17:07:00,254 PID: 23118 cluster.py:667 - DEBUG - updating existing node i-a5a334d8 in self._nodes</font></div>
<div><font color="#632423">2012-10-04 17:07:00,254 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>]</font></div>
<div><font color="#632423">2012-10-04 17:07:00,349 PID: 23118 __init__.py:75 - DEBUG - loading private key /home/ec2-user/.ssh/STAR_KEY</font></div>
<div><font color="#632423">2012-10-04 17:07:00,349 PID: 23118 __init__.py:82 - DEBUG - specified key does not end in either rsa or dsa, trying both</font></div>
<div><font color="#632423">2012-10-04 17:07:00,350 PID: 23118 __init__.py:167 - DEBUG - Using private key /home/ec2-user/.ssh/STAR_KEY (rsa)</font></div>
<div><font color="#632423">2012-10-04 17:07:00,351 PID: 23118 __init__.py:97 - DEBUG - connecting to host ec2-23-20-80-59.compute-1.amazonaws.com on port 22 as user root</font></div>
<div><font color="#632423">2012-10-04 17:07:33,958 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {u'i-a5a334d8': <Node: master (i-a5a334d8)>}</font></div>
<div><font color="#632423">2012-10-04 17:07:33,959 PID: 23118 cluster.py:667 - DEBUG - updating existing node i-a5a334d8 in self._nodes</font></div>
<div><font color="#632423">2012-10-04 17:07:33,959 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>]</font></div>
<div><font color="#632423">2012-10-04 17:07:34,039 PID: 23118 __init__.py:97 - DEBUG - connecting to host ec2-23-20-80-59.compute-1.amazonaws.com on port 22 as user root</font></div>
<div><font color="#632423">2012-10-04 17:08:04,156 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {u'i-a5a334d8': <Node: master (i-a5a334d8)>}</font></div>
<div><font color="#632423">2012-10-04 17:08:04,157 PID: 23118 cluster.py:667 - DEBUG - updating existing node i-a5a334d8 in self._nodes</font></div>
<div><font color="#632423">2012-10-04 17:08:04,157 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>]</font></div>
<div><font color="#632423">2012-10-04 17:08:04,229 PID: 23118 __init__.py:97 - DEBUG - connecting to host ec2-23-20-80-59.compute-1.amazonaws.com on port 22 as user root</font></div>
<div><font color="#632423">2012-10-04 17:08:05,196 PID: 23118 __init__.py:186 - DEBUG - creating sftp connection</font></div>
<div><font color="#632423">2012-10-04 17:08:06,213 PID: 23118 utils.py:93 - INFO - Waiting for cluster to come up took 1.634 mins</font></div>
<div><font color="#632423">2012-10-04 17:08:06,214 PID: 23118 cluster.py:1454 - INFO - The master node is ec2-23-20-80-59.compute-1.amazonaws.com</font></div>
<div><font color="#632423">2012-10-04 17:08:06,215 PID: 23118 cluster.py:1455 - INFO - Setting up the cluster...</font></div>
<div><font color="#632423">2012-10-04 17:08:06,377 PID: 23118 cluster.py:664 - DEBUG - existing nodes: {u'i-a5a334d8': <Node: master (i-a5a334d8)>}</font></div>
<div><font color="#632423">2012-10-04 17:08:06,378 PID: 23118 cluster.py:667 - DEBUG - updating existing node i-a5a334d8 in self._nodes</font></div>
<div><font color="#632423">2012-10-04 17:08:06,378 PID: 23118 cluster.py:672 - DEBUG - adding node i-e9ae3994 to self._nodes list</font></div>
<div><font color="#632423">2012-10-04 17:08:07,510 PID: 23118 cluster.py:680 - DEBUG - returning self._nodes = [<Node: master (i-a5a334d8)>, <Node: node001 (i-e9ae3994)>]</font></div>
<div><font color="#632423">2012-10-04 17:08:07,511 PID: 23118 clustersetup.py:90 - INFO - Configuring hostnames...</font></div>
<div><font color="#632423">2012-10-04 17:08:07,516 PID: 23118 threadpool.py:135 - DEBUG - unfinished_tasks = 2</font></div>
<div><font color="#632423">2012-10-04 17:08:07,517 PID: 23118 __init__.py:75 - DEBUG - loading private key /home/ec2-user/.ssh/STAR_KEY</font></div>
<div><font color="#632423">2012-10-04 17:08:07,517 PID: 23118 __init__.py:82 - DEBUG - specified key does not end in either rsa or dsa, trying both</font></div>
<div><font color="#632423">2012-10-04 17:08:07,519 PID: 23118 __init__.py:167 - DEBUG - Using private key /home/ec2-user/.ssh/STAR_KEY (rsa)</font></div>
<div><font color="#632423">2012-10-04 17:08:07,520 PID: 23118 __init__.py:186 - DEBUG - creating sftp connection</font></div>
<div><font color="#632423">2012-10-04 17:08:07,520 PID: 23118 __init__.py:97 - DEBUG - connecting to host on port 22 as user root</font></div>
<div><font color="#632423">2012-10-04 17:08:08,517 PID: 23118 threadpool.py:123 - INFO - Shutting down threads...</font></div>
<div><font color="#632423">2012-10-04 17:08:08,518 PID: 23118 threadpool.py:135 - DEBUG - unfinished_tasks = 20</font></div>
<div><font color="#632423">2012-10-04 17:08:09,520 PID: 23118 cli.py:266 - DEBUG - error occurred in job (id=node001): failed to connect to host on port 22</font></div>
<div><font color="#632423">Traceback (most recent call last):</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/threadpool.py", line 31, in run</font></div>
<div><font color="#632423"> job.run()</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/threadpool.py", line 58, in run</font></div>
<div><font color="#632423"> r = self.method(*self.args, **self.kwargs)</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/node.py", line 696, in set_hostname</font></div>
<div><font color="#632423"> hostname_file = self.ssh.remote_file("/etc/hostname", "w")</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/sshutils/__init__.py", line 296, in remote_file</font></div>
<div><font color="#632423"> rfile = self.sftp.open(file, mode)</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/sshutils/__init__.py", line 187, in sftp</font></div>
<div><font color="#632423"> self._sftp = ssh.SFTPClient.from_transport(self.transport)</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/sshutils/__init__.py", line 136, in transport</font></div>
<div><font color="#632423"> port=self._port, timeout=self._timeout)</font></div>
<div><font color="#632423"> File "/usr/lib/python2.6/site-packages/StarCluster-0.93.3-py2.6.egg/starcluster/sshutils/__init__.py", line 103, in connect</font></div>
<div><font color="#632423"> raise exception.SSHConnectionError(host, port)</font></div>
<div><font color="#632423">SSHConnectionError: failed to connect to host on port 22</font></div>
<div><font color="#632423"> </font></div>
<div><font color="#632423">---------- SYSTEM INFO ----------</font></div>
<div><font color="#632423">StarCluster: 0.93.3</font></div>
<div><font color="#632423">Python: 2.6.8 (unknown, Jun 29 2012, 06:50:56) [GCC 4.4.6 20110731 (Red Hat 4.4.6-3)]</font></div>
<div><font color="#632423">Platform: Linux-3.2.21-1.32.6.amzn1.x86_64-x86_64-with-glibc2.2.5</font></div>
<div><font color="#632423">boto: 2.3.0</font></div>
<div><font color="#632423">ssh: 1.7.13</font></div>
<div><font color="#632423">Crypto: 2.6</font></div>
<div><font color="#632423">jinja2: 2.6</font></div>
<div><font color="#632423">decorator: 3.3.1</font></div>
<div><font face="Calibri, sans-serif" size="2"> </font></div>
<div>Thank you,</div>
<div>-Joe</div>
<div><font face="Calibri, sans-serif" size="2"> </font></div>
<div><font face="Courier New, monospace" size="2" color="#FF0000">joe_shpungin@merck.com<font face="Calibri, sans-serif" size="2"> </font></font></div>
<div><font face="Calibri, sans-serif" size="2" color="#FF0000"> </font></div>
<div><font face="Calibri, sans-serif" size="2"> </font></div>
<div><font face="Calibri, sans-serif" size="2"> </font></div>
</font>
<p>Notice: This e-mail message, together with any attachments, contains<br>
information of Merck & Co., Inc. (One Merck Drive, Whitehouse Station,<br>
New Jersey, USA 08889), and/or its affiliates Direct contact information<br>
for affiliates is available at <br>
http://www.merck.com/contact/contacts.html) that may be confidential,<br>
proprietary copyrighted and/or legally privileged. It is intended solely<br>
for the use of the individual or entity named on this message. If you are<br>
not the intended recipient, and have received this message in error,<br>
please notify us immediately by reply e-mail and then delete it from <br>
your system.</p></body>
</html>