Looks like you can't have any uppercase letters in your argument names.<div>Dan</div><div><br><br><div class="gmail_quote">On Sun, Oct 31, 2010 at 2:56 PM, Dan Tenenbaum <span dir="ltr"><<a href="mailto:dtenenba@fhcrc.org">dtenenba@fhcrc.org</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;"><div><div></div><div class="h5">Hi, I am getting:<div><br></div><div><div>PluginError: Not enough settings provided for plugin shortreadplugin</div>
<div><br></div></div><div>where I don't think I should.</div><div><br></div><div>My config:</div><div>
<br></div><div><div>[plugin shortreadplugin]</div><div>SETUP_CLASS = bioconductor.ShortReadPlugin</div><div>email=my@email.address</div><div>job_name=myfirsttest</div><div>output_bucket=my-bucket-name</div><div>access_key=my_access_key</div>
<div>secret_key=my_secret_key</div><div>dirPath=testsolexaexportfiles</div><div>_type=SolexaExport</div><div>pattern=s_3_export.txt</div><div>Lpattern=None</div><div>Rpattern=None</div><div>param=None</div></div><div><br>
</div><div><br></div><div>My plugin constructor signature line:</div><div> def __init__(self, email, job_name, output_bucket, access_key, secret_key, dirPath, _type, pattern, Lpattern, Rpattern, param):</div><div><br>
</div><div>There are 11 parameters passed to the plugin in the config file (excepting SETUP_CLASS). And there are 11 variables expected in the plugin constructor (excepting self).</div><div><br></div><div>So why is this telling me I am not passing enough settings?</div>
<div><br></div><div>Thanks</div><div>Dan</div><div><br></div><div><br></div>
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<br></blockquote></div><br></div>