[StarCluster] StarGenetics issues

[Ramon Ramirez-Linan]

That is a great use Ed.
We use Pcluster at everage Spot Instances too, from earth science to space
science

Ramon

On Wed, Jul 14, 2021 at 10:15 AM Ed Gray <gray_ed at hotmail.com> wrote:

> We used StarCluster to leverage spot instance pricing for bioinformatics.
> Many compute years over a weekend to chug through 40000 genes over 10
> species.
>
>
> -------- Original message --------
> From: Ramon Ramirez-Linan <rlinan at navteca.com>
> Date: 7/14/21 8:01 AM (GMT-06:00)
> To: Ed Gray <gray_ed at hotmail.com>
> Cc: Ryan G <ngsbioinformatics at gmail.com>, "Marcey, David" <
> marcey at callutheran.edu>, starcluster at mit.edu
> Subject: Re: [StarCluster] StarGenetics issues
>
> I was an active user of StarCluster for HPC on the agency I work for, but
> since AWS launched Pcluster I dont see the point and have switched to this
> other tool.
>
> Ramon
>
> On Tue, Jul 13, 2021 at 6:47 PM Ed Gray <gray_ed at hotmail.com> wrote:
>
>> oh man, finally a StarCluster group email and its unrelated.
>>
>> wow.
>>
>> oh how the mighty have fallen.
>>
>>
>> -------- Original message --------
>> From: Ryan G <ngsbioinformatics at gmail.com>
>> Date: 7/13/21 5:40 PM (GMT-06:00)
>> To: "Marcey, David" <marcey at callutheran.edu>
>> Cc: starcluster at mit.edu
>> Subject: Re: [StarCluster] StarGenetics issues
>>
>> To my knowledge, that tool is not related to starcluster.
>>
>> Please excuse any typos -- Sent from my iPad
>>
>> On Jul 13, 2021, at 3:24 PM, Marcey, David <marcey at callutheran.edu>
>> wrote:
>>
>> 
>>
>> I’m using the Star Genetics Instructor page to create new SG problems (
>> http://star-genetics-instructor.surge.sh/).
>>
>>
>>
>> The encrypt and save does not work for me if I use genes on different
>> chromosomes. Firefox or Chrome browser.
>>
>>
>>
>> I can encrypt and save if multiple genes are on different chromosomes.
>>
>>
>>
>> However, I am getting anomalous results in simple dihybrid crosses with
>> unlinked genes.
>>
>>
>>
>> Any advice would be most appreciated!
>>
>>
>>
>> David Marcey
>>
>>
>>
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>>
>> David J. Marcey
>>
>> Fletcher Jones Professor of Developmental Biology
>>
>> The Center for Active Learning
>>
>> California Lutheran University
>>
>> 60 West Olsen Road., MC#3700
>>
>> Thousand Oaks, CA  91360
>>
>> marcey at callutheran.edu
>>
>>
>>
>> *he/him/his*
>>
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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>
>
> --
>
> Ramon Ramirez-Linan |
> * Navteca | C: 301.789.9139 |  * @ramonlinan
> <https://twitter.com/RamonLinan>
> Emerging Technology, Innovation Solutions
> (NAICS Codes - 518210, 541511, 541512, 541519, 541990)
> *Co-founder*
>
>  www.navteca.com   |  @Navteca  <https://twitter.com/Navteca>
>
>
>
>
>
>
>  www.navteca.com   |  @Navteca  <https://twitter.com/Navteca>
>


-- 

Ramon Ramirez-Linan |
*Navteca | C: 301.789.9139 | * @ramonlinan <https://twitter.com/RamonLinan>
Emerging Technology, Innovation Solutions
(NAICS Codes - 518210, 541511, 541512, 541519, 541990)
*Co-founder*

 www.navteca.com   |  @Navteca  <https://twitter.com/Navteca>

-- 






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