[StarCluster] bug report for updated Starcluster release 0.94.3 - Windows 7

Emilia Vynnycky Emilia.Vynnycky at lshtm.ac.uk
Thu Dec 12 18:21:24 EST 2013


Hello Justin
Thanks - this seems to have worked.
Emilia

>>> Justin Riley <jtriley at MIT.EDU> 12/12/2013 18:59 >>>
Hi Emilia,

If you're using pip there's no need to download StarCluster by hand -
pip will handle fetching the downloads. However, by default pip will not
upgrade packages if they're already installed unless you tell it to do
so using the -U option. Please give the following command a try and let
me know if it works for you:

$ pip install -U starcluster
$ starcluster --version

(should be 0.94.3)

Thanks!

~Justin

On Thu, Dec 12, 2013 at 05:13:38PM +0000, Emilia Vynnycky wrote:
>    Hello Justin
>    Many thanks for the reply.  That's helpful to know.  I've since been able
>    to launch further clusters and have not had similar problems.
>     
>    However, I am a bit unclear about how to install the latest version of
>    starcluster under Windows 7 if an earlier version has already been
>    installed. I thought that I had installed the latest version, but the old
>    version number keeps appearing.
>     
>    In brief, I downloaded the file starcluster-0.93.tar.gz and unzipped to a
>    folder on my hard disk.  I then went to the folder and ran pip install
>    startcluster [note that easy install starcluster didn't work previously -
>    see another post].  Is there a different method for upgrading the version
>    under Windows 7? 
>     
>    Thanks
>    Emilia
>     
>     
>     
>     
>     
>     
> 
>    >>> Justin Riley <jtriley at MIT.EDU> 12/12/2013 16:56 >>>
>    Hi Emilia,
> 
>    The exception occured because of a failure to properly fetch the
>    instance's userdata. I'm going to update the code to raise a better
>    error when this happens. If this happens again try waiting a few seconds
>    and re-running your start command and passing the --no-create (-x)
>    option. That will re-use the existing cluster instances and try again.
> 
>    Also, from the crash report you sent it looks like you're using 0.94.2.
>    Could you please double check the version you're using and try upgrading
>    again if it's not 0.94.3? Thanks!
> 
>    ~Justin
> 
>    On Wed, Nov 27, 2013 at 12:34:37PM +0000, Emilia Vynnycky wrote:
>    >    Hello
>    >    I've just installed the updated version of Starcluster (version
>    0.94.3).
>    >    
>    >    However, when I tried to access the cluster that I had set up in the
>    >    previous version, I received the following bug report.  Could someone
>    >    advise on what I should do please?   The cluster had been terminated
>    >    before I ran this.
>    >    
>    >    In case it's relevant, I'm running this under Windows 7 and following
>    >    previous problems (see posting dated 14/11/13), I used the command
>    pip
>    >    install starcluster to install the latest version.
>    >    
>    >    Thanks in advance
>    >    
>    >    Emilia
>    >    
>    >    ---------- SYSTEM INFO ----------
>    >    StarCluster: 0.94.2
>    >    Python: 2.7.5 (default, May 15 2013, 22:43:36) [MSC v.1500 32 bit
>    (Intel)]
>    >    Platform: Windows-7-6.1.7601-SP1
>    >    boto: 2.18.0
>    >    paramiko: 1.12.0
>    >    Crypto: 2.6
>    >    
>    >    ---------- CRASH DETAILS ----------
>    >    Command: starcluster-script.py start thibela-build
>    >    
>    >    2013-11-27 12:20:43,398 PID: 8868 config.py:567 - DEBUG - Loading
>    config
>    >    2013-11-27 12:20:43,413 PID: 8868 config.py:138 - DEBUG - Loading
>    file:
>    >    C:\Users\user\.starcluster\config
>    >    2013-11-27 12:20:43,430 PID: 8868 awsutils.py:74 - DEBUG - creating
>    >    self._conn w/ connection_authenticator kwargs = {'proxy_user': None,
>    >    'proxy_pass': None, 'proxy_port': None, 'proxy': None, 'is_secure':
>    True,
>    >    'path': '/', 'region': None, 'validate_certs': True, 'port': None}
>    >    2013-11-27 12:20:45,539 PID: 8868 start.py:197 - INFO - Using default
>    >    cluster template: smallcluster
>    >    2013-11-27 12:20:45,539 PID: 8868 cluster.py:1660 - INFO - Validating
>    >    cluster template settings...
>    >    2013-11-27 12:20:47,316 PID: 8868 cluster.py:982 - DEBUG - Launch
>    map:
>    >    node001 (ami: ami-9b9ebaf2, type: m1.small)...
>    >    2013-11-27 12:20:47,316 PID: 8868 cluster.py:982 - DEBUG - Launch
>    map:
>    >    node001 (ami: ami-9b9ebaf2, type: m1.small)...
>    >    2013-11-27 12:20:47,365 PID: 8868 cluster.py:801 - DEBUG - Userdata
>    size
>    >    in KB: 0.54
>    >    2013-11-27 12:20:47,365 PID: 8868 cluster.py:1677 - INFO - Cluster
>    >    template settings are valid
>    >    2013-11-27 12:20:47,365 PID: 8868 cluster.py:1498 - INFO - Starting
>    >    cluster...
>    >    2013-11-27 12:20:47,365 PID: 8868 cluster.py:1008 - INFO - Launching
>    a
>    >    2-node cluster...
>    >    2013-11-27 12:20:47,367 PID: 8868 cluster.py:982 - DEBUG - Launch
>    map:
>    >    node001 (ami: ami-9b9ebaf2, type: m1.small)...
>    >    2013-11-27 12:20:47,367 PID: 8868 cluster.py:1036 - DEBUG - Launching
>    >    master (ami: ami-9b9ebaf2, type: m1.small)
>    >    2013-11-27 12:20:47,367 PID: 8868 cluster.py:1036 - DEBUG - Launching
>    >    node001 (ami: ami-9b9ebaf2, type: m1.small)
>    >    2013-11-27 12:20:47,551 PID: 8868 awsutils.py:247 - INFO - Creating
>    >    security group @sc-thibela-build...
>    >    2013-11-27 12:20:50,388 PID: 8868 cluster.py:801 - DEBUG - Userdata
>    size
>    >    in KB: 0.55
>    >    2013-11-27 12:20:51,003 PID: 8868 awsutils.py:432 - DEBUG - Forcing
>    >    delete_on_termination for AMI: ami-9b9ebaf2
>    >    2013-11-27 12:20:51,959 PID: 8868 cluster.py:847 - INFO -
>    >    Reservation:r-a44340dd
>    >    2013-11-27 12:20:51,959 PID: 8868 utils.py:624 - INFO - Waiting for
>    >    instances to propagate...
>    >    2013-11-27 12:20:53,334 PID: 8868 cluster.py:1298 - INFO - Waiting
>    for
>    >    cluster to come up... (updating every 30s)
>    >    2013-11-27 12:20:53,561 PID: 8868 cluster.py:1255 - INFO - Waiting
>    for all
>    >    nodes to be in a 'running' state...
>    >    2013-11-27 12:20:53,971 PID: 8868 cluster.py:711 - DEBUG - existing
>    nodes:
>    >    {}
>    >    2013-11-27 12:20:53,971 PID: 8868 cluster.py:719 - DEBUG - adding
>    node
>    >    i-da130da1 to self._nodes list
>    >    2013-11-27 12:20:54,890 PID: 8868 cluster.py:719 - DEBUG - adding
>    node
>    >    i-c4130dbf to self._nodes list
>    >    2013-11-27 12:20:55,198 PID: 8868 cli.py:307 - ERROR - Unhandled
>    exception
>    >    occured
>    >    Traceback (most recent call last):
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cli.py",
>    >    line 274, in main
>    >        sc.execute(args)
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\commands\start.py",
>    >    line 215, in execute
>    >        validate_running=validate_running)
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 1485, in start
>    >        return self._start(create=create, create_only=create_only)
>    >      File "<string>", line 2, in _start
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\utils.py",
>    >    line 111, in wrap_f
>    >        res = func(*arg, **kargs)
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 1508, in _start
>    >        self.setup_cluster()
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 1516, in setup_cluster
>    >        self.wait_for_cluster()
>    >      File "<string>", line 2, in wait_for_cluster
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\utils.py",
>    >    line 111, in wrap_f
>    >        res = func(*arg, **kargs)
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 1301, in wait_for_cluster
>    >        self.wait_for_running_instances()
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 1256, in wait_for_running_instances
>    >        nodes = nodes or self.get_nodes_or_raise()
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 731, in get_nodes_or_raise
>    >        nodes = self.nodes
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\cluster.py",
>    >    line 721, in nodes
>    >        if n.is_master():
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\node.py",
>    >    line 884, in is_master
>    >        return self.alias == "master"
>    >      File
>    >   
>    "C:\Python27\lib\site-packages\starcluster-0.94.2-py2.7.egg\starcluster\node.py",
>    >    line 140, in alias
>    >        aliases = aliasestxt.splitlines()[2:]
>    >    AttributeError: 'NoneType' object has no attribute 'splitlines'
> 
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> References
> 
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