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<p class="MsoNormal">Dear all,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"> I am from City of Hope National Medical Center, Duarte, CA.<o:p></o:p></p>
<p class="MsoNormal"> Currently, I met with the problem of running MISO. It is shown as below.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal" style="text-autospace:none"><span style="font-family:"Courier New"">miso_main - WARNING - Asked to wait on cluster jobs but cannot parse their job IDs from the cluster submission system.<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"> In my output folder, the subfolders are shown as below.<o:p></o:p></p>
<p class="MsoNormal"><img width="196" height="119" id="Picture_x0020_1" src="cid:image001.png@01D7A3D2.1DFF76E0"><o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Based on the MISO instructions, the correct subfolders should be like this shown as below.<o:p></o:p></p>
<p class="MsoNormal" style="background:#FCFCFC"><span style="font-size:9.0pt;font-family:Consolas;color:#404040">my_sample_output/<o:p></o:p></span></p>
<p class="MsoNormal" style="background:#FCFCFC"><span style="font-size:9.0pt;font-family:Consolas;color:#404040"> chr1/<o:p></o:p></span></p>
<p class="MsoNormal" style="background:#FCFCFC"><span style="font-size:9.0pt;font-family:Consolas;color:#404040"> chr2/<o:p></o:p></span></p>
<p class="MsoNormal" style="background:#FCFCFC"><span style="font-size:9.0pt;font-family:Consolas;color:#404040"> ...<o:p></o:p></span></p>
<p class="MsoNormal" style="background:#FCFCFC"><span style="font-size:9.0pt;font-family:Consolas;color:#404040"> chrX/<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span style="font-size:10.5pt;font-family:"Arial","sans-serif";color:#333333;background:white"> Has anybody got the same warning and errors before? Big thanks for your great help.<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Best<o:p></o:p></p>
<p class="MsoNormal">Chris<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
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