<div dir="ltr"><div><div><div>If trying to use the latest MISO version and<br>&quot;compare_miso --compare-samples WT  KO comparison&quot;<br></div><br>I would get an error that sample names are not found:<br><br>  File &quot;/arch/Linux-x86_64/bin/compare_miso&quot;, line 9, in &lt;module&gt;<br>
    load_entry_point(&#39;misopy==0.5.1&#39;, &#39;console_scripts&#39;, &#39;compare_miso&#39;)()<br>  File &quot;.local/lib/python2.7/site-packages/misopy-0.5.1-py2.7-linux-x86_64.egg/misopy/compare_miso.py&quot;, line 94, in main<br>
    use_compressed=use_compressed)<br>  File &quot;local/lib/python2.7/site-packages/misopy-0.5.1-py2.7-linux-x86_64.egg/misopy/hypothesis_test.py&quot;, line 266, in output_samples_comparison<br>    diff_range)<br>  File &quot;.local/lib/python2.7/site-packages/misopy-0.5.1-py2.7-linux-x86_64.egg/misopy/hypothesis_test.py&quot;, line 156, in compute_delta_densities<br>
    %(samples1_filename, samples2_filename)<br><br></div>it does not help to specify the comparison-labels, I have tried that too.<br></div><div><br></div><br></div>