<div dir="ltr">Hi all - <div>I am not too familiar with python, and after installing miso ran the test_miso.py script and got this error at the last step. I got the same error running run_events_analysis.py on my own data. Any help would be greatly appreciated!</div>
<div style>Thanks,</div><div style>Matt</div><div><br></div><div><div>Executing: python /home/mbj2/misopy-0.4.9/misopy/run_events_analysis.py --compute-genes-psi /home/mbj2/misopy-0.4.9/misopy/gff-events/mm9/genes/Atp2b1/indexed /home/mbj2/misopy-0.4.9/misopy/test-output/sam-output/c2c12.Atp2b1.sorted.bam --output-dir /home/mbj2/misopy-0.4.9/misopy/test-output/gene-psi-output --read-len 35 </div>
<div>Traceback (most recent call last):</div><div> File "/home/mbj2/misopy-0.4.9/misopy/run_events_analysis.py", line 16, in <module></div><div> import misopy.run_miso as run_miso</div><div> File "/home/mbj2/.local/lib/python2.6/site-packages/misopy/run_miso.py", line 18, in <module></div>
<div> import misopy.miso_sampler as miso</div><div> File "/home/mbj2/.local/lib/python2.6/site-packages/misopy/miso_sampler.py", line 169, in <module></div><div> class MISOSampler:</div><div> File "/home/mbj2/.local/lib/python2.6/site-packages/misopy/miso_sampler.py", line 210, in MISOSampler</div>
<div> algorithm=pysplicing.MISO_ALGO_CLASSES,</div><div>AttributeError: 'module' object has no attribute 'MISO_ALGO_CLASSES'</div><div>.</div><div>----------------------------------------------------------------------</div>
<div>Ran 3 tests in 2.133s</div><div><br></div><div>OK</div><div><br></div><br clear="all"><div><br></div></div></div>