[miso-users] about: error from miso

Hailei Zhang hailei.nus at gmail.com
Tue Feb 2 12:02:58 EST 2016


Hi

I installed miso successfully, no error message. When I tried to test MISO,
I got the following error:

miso

Traceback (most recent call last):

  File "/cga/tcga-gdac/hailei/MISO/misoenv/bin/miso", line 8, in <module>

    load_entry_point('misopy==0.5.3', 'console_scripts', 'miso')()

  File "build/bdist.linux-i686/egg/pkg_resources.py", line 318, in
load_entry_point

  File "build/bdist.linux-i686/egg/pkg_resources.py", line 2221, in
load_entry_point

  File "build/bdist.linux-i686/egg/pkg_resources.py", line 1954, in load

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/misopy/miso.py",
line 18, in <module>

    import misopy.run_miso as run_miso

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/misopy/run_miso.py",
line 14, in <module>

    import misopy.hypothesis_test as ht

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/misopy/hypothesis_test.py",
line 7, in <module>

    from scipy import stats

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/stats/__init__.py",
line 338, in <module>

    from .stats import *

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/stats/stats.py",
line 180, in <module>

    import scipy.special as special

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/special/__init__.py",
line 629, in <module>

    from .basic import *

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/special/basic.py",
line 18, in <module>

    from . import orthogonal

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/special/orthogonal.py",
line 101, in <module>

    from scipy import linalg

  File
"/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/linalg/__init__.py",
line 190, in <module>

    from ._decomp_update import *

  File "scipy/linalg/_decomp_update.pyx", line 1, in init
scipy.linalg._decomp_update (scipy/linalg/_decomp_update.c:39096)

ImportError:
/cga/tcga-gdac/hailei/MISO/misoenv/lib/python2.7/site-packages/scipy/linalg/cython_lapack.so:
undefined symbol: zlacn2_


Thanks,

Hailei
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