[miso-users] How to get isoform ID in the output file

[Delong, Zhou]

Hello,
I used miso with human genome annotations provided by the miso webpage and I am wondering if I can have gene name / isoform ID instead of positions of each exon as identification of events.
For instance here is an example of output:

Event name: chrUn_gl000223:98910:99036:- at chrUn_gl000223:98546:98641:- at chrUn_gl000223:93510:95942:-
Isoforms: 'chrUn_gl000223:98910:99036:- at chrUn_gl000223:98546:98641:- at chrUn_gl000223:93510:95942:-.A.dn_chrUn_gl000223:98910:99036:- at chrUn_gl000223:98546:98641:- at chrUn_gl000223:93510:95942:-.A.se_chrUn_gl000223:98910:99036:- at chrUn_gl000223:98546:98641:- at chrUn_gl000223:93510:95942:-.A.up','chrUn_gl000223:98910:99036:- at chrUn_gl000223:98546:98641:- at chrUn_gl000223:93510:95942:-.B.dn_chrUn_gl000223:98910:99036:- at chrUn_gl000223:98546:98641:- at chrUn_gl000223:93510:95942:-.B.up'

I'd like to map this to an UCSC annotation or ensembl id. Does miso have an option to do that?
Thanks,
Delong
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mailman.mit.edu/pipermail/miso-users/attachments/20130830/d882bee1/attachment.htm