[miso-users] MISO 0.4.8 release

Yarden Katz yarden at MIT.EDU
Sun Apr 14 12:57:05 EDT 2013


New MISO (version 0.4.8) is released, with some bug fixes, and a new, much faster inference algorithm for single-end reads:

manual: http://miso.readthedocs.org/
download: https://pypi.python.org/pypi/misopy

With the new algorithm, processing all skipped exons from a Hi-Seq lane in mouse genome takes about roughly five minutes on a cluster now.  The algorithm does not scale with the number of reads anymore, so the speedup is greatest for higher coverage data.  (Increase in speed only applies to single-end data.)

 --Yarden






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