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<p>Dear Ecco team,</p>
<p>I am having troubles installing ecco_v4_py in my conda
environement using pip. I paste below the (impressive!) error
message I got. I thought you may have encountered this problem
before, and might be able to help.</p>
<p>Many thanks in advance,</p>
<p>Damien<br>
</p>
<p><br>
</p>
<p>(pydam36) bash-3.2$ pip install ecco_v4_py --no-cache-dir<br>
Collecting ecco_v4_py<br>
Downloading
<a class="moz-txt-link-freetext" href="https://files.pythonhosted.org/packages/0e/86/b1638f08f0bfc8e0f09fedf0196b94aa33997d8c5effb1cbb375e7f40e21/ecco_v4_py-1.0.10.tar.gz">https://files.pythonhosted.org/packages/0e/86/b1638f08f0bfc8e0f09fedf0196b94aa33997d8c5effb1cbb375e7f40e21/ecco_v4_py-1.0.10.tar.gz</a>
(56kB)<br>
|████████████████████████████████| 61kB 2.4MB/s<br>
Requirement already satisfied: cython in
./lib/python3.7/site-packages (from ecco_v4_py) (0.29.13)<br>
Requirement already satisfied: shapely in
./lib/python3.7/site-packages (from ecco_v4_py) (1.6.4.post1)<br>
Requirement already satisfied: proj in
./lib/python3.7/site-packages (from ecco_v4_py) (0.1.0)<br>
Requirement already satisfied: six in
./lib/python3.7/site-packages (from ecco_v4_py) (1.12.0)<br>
Requirement already satisfied: dask[complete] in
./lib/python3.7/site-packages (from ecco_v4_py) (2.0.0)<br>
Requirement already satisfied: datetime in
./lib/python3.7/site-packages (from ecco_v4_py) (4.3)<br>
Requirement already satisfied: python-dateutil in
./lib/python3.7/site-packages (from ecco_v4_py) (2.8.0)<br>
Requirement already satisfied: matplotlib in
./lib/python3.7/site-packages (from ecco_v4_py) (3.1.0)<br>
Requirement already satisfied: numpy in
./lib/python3.7/site-packages (from ecco_v4_py) (1.16.4)<br>
Collecting pyresample (from ecco_v4_py)<br>
Downloading
<a class="moz-txt-link-freetext" href="https://files.pythonhosted.org/packages/28/5d/39c566fa3a0b39b979bc24ce33445b0b0ba8ec570cf331b3de0064ba8a61/pyresample-1.12.3.tar.gz">https://files.pythonhosted.org/packages/28/5d/39c566fa3a0b39b979bc24ce33445b0b0ba8ec570cf331b3de0064ba8a61/pyresample-1.12.3.tar.gz</a>
(4.1MB)<br>
|████████████████████████████████| 4.1MB 4.4MB/s<br>
Requirement already satisfied: xarray in
./lib/python3.7/site-packages (from ecco_v4_py) (0.12.1)<br>
Requirement already satisfied: xmitgcm in
./lib/python3.7/site-packages (from ecco_v4_py) (0.3.0)<br>
Requirement already satisfied: pyyaml in
./lib/python3.7/site-packages (from ecco_v4_py) (5.1.1)<br>
Requirement already satisfied: pyproj in
./lib/python3.7/site-packages (from ecco_v4_py) (1.9.6)<br>
Requirement already satisfied: pykdtree in
./lib/python3.7/site-packages (from ecco_v4_py) (1.3.1)<br>
Requirement already satisfied: cartopy in
./lib/python3.7/site-packages (from ecco_v4_py) (0.17.0)<br>
Requirement already satisfied: xgcm in
./lib/python3.7/site-packages (from ecco_v4_py) (0.2.0)<br>
Requirement already satisfied: arrow>=0.4.4 in
./lib/python3.7/site-packages (from proj->ecco_v4_py) (0.14.4)<br>
Requirement already satisfied: click>=3.3 in
./lib/python3.7/site-packages (from proj->ecco_v4_py) (7.0)<br>
Requirement already satisfied: bokeh>=1.0.0; extra ==
"complete" in ./lib/python3.7/site-packages (from
dask[complete]->ecco_v4_py) (1.2.0)<br>
Requirement already satisfied: partd>=0.3.10; extra ==
"complete" in ./lib/python3.7/site-packages (from
dask[complete]->ecco_v4_py) (1.0.0)<br>
Requirement already satisfied: cloudpickle>=0.2.1; extra ==
"complete" in ./lib/python3.7/site-packages (from
dask[complete]->ecco_v4_py) (1.2.1)<br>
Requirement already satisfied: distributed>=2.0; extra ==
"complete" in ./lib/python3.7/site-packages (from
dask[complete]->ecco_v4_py) (2.0.1)<br>
Requirement already satisfied: pandas>=0.21.0; extra ==
"complete" in ./lib/python3.7/site-packages (from
dask[complete]->ecco_v4_py) (0.24.2)<br>
Requirement already satisfied: toolz>=0.7.3; extra ==
"complete" in ./lib/python3.7/site-packages (from
dask[complete]->ecco_v4_py) (0.9.0)<br>
Requirement already satisfied: pytz in
./lib/python3.7/site-packages (from datetime->ecco_v4_py)
(2019.1)<br>
Requirement already satisfied: zope.interface in
./lib/python3.7/site-packages (from datetime->ecco_v4_py)
(4.6.0)<br>
Requirement already satisfied: cycler>=0.10 in
./lib/python3.7/site-packages (from matplotlib->ecco_v4_py)
(0.10.0)<br>
Requirement already satisfied: kiwisolver>=1.0.1 in
./lib/python3.7/site-packages (from matplotlib->ecco_v4_py)
(1.1.0)<br>
Requirement already satisfied:
pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in
./lib/python3.7/site-packages (from matplotlib->ecco_v4_py)
(2.4.0)<br>
Requirement already satisfied: setuptools>=3.2 in
./lib/python3.7/site-packages (from pyresample->ecco_v4_py)
(41.0.1)<br>
Requirement already satisfied: configobj in
./lib/python3.7/site-packages (from pyresample->ecco_v4_py)
(5.0.6)<br>
Requirement already satisfied: pyshp>=1.1.4 in
./lib/python3.7/site-packages (from cartopy->ecco_v4_py)
(2.1.0)<br>
Requirement already satisfied: docrep in
./lib/python3.7/site-packages (from xgcm->ecco_v4_py) (0.2.7)<br>
Requirement already satisfied: future in
./lib/python3.7/site-packages (from xgcm->ecco_v4_py) (0.17.1)<br>
Requirement already satisfied: packaging>=16.8 in
./lib/python3.7/site-packages (from bokeh>=1.0.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (19.0)<br>
Requirement already satisfied: tornado>=4.3 in
./lib/python3.7/site-packages (from bokeh>=1.0.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (6.0.3)<br>
Requirement already satisfied: pillow>=4.0 in
./lib/python3.7/site-packages (from bokeh>=1.0.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (6.0.0)<br>
Requirement already satisfied: Jinja2>=2.7 in
./lib/python3.7/site-packages (from bokeh>=1.0.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (2.10.1)<br>
Requirement already satisfied: locket in
./lib/python3.7/site-packages (from partd>=0.3.10; extra ==
"complete"->dask[complete]->ecco_v4_py) (0.2.0)<br>
Requirement already satisfied: psutil>=5.0 in
./lib/python3.7/site-packages (from distributed>=2.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (5.6.3)<br>
Requirement already satisfied: zict>=0.1.3 in
./lib/python3.7/site-packages (from distributed>=2.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (1.0.0)<br>
Requirement already satisfied: sortedcontainers!=2.0.0,!=2.0.1 in
./lib/python3.7/site-packages (from distributed>=2.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (2.1.0)<br>
Requirement already satisfied: msgpack in
./lib/python3.7/site-packages (from distributed>=2.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (0.6.1)<br>
Requirement already satisfied: tblib in
./lib/python3.7/site-packages (from distributed>=2.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (1.4.0)<br>
Requirement already satisfied: MarkupSafe>=0.23 in
./lib/python3.7/site-packages (from
Jinja2>=2.7->bokeh>=1.0.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (1.1.1)<br>
Requirement already satisfied: heapdict in
./lib/python3.7/site-packages (from
zict>=0.1.3->distributed>=2.0; extra ==
"complete"->dask[complete]->ecco_v4_py) (1.0.0)<br>
Building wheels for collected packages: ecco-v4-py, pyresample<br>
Building wheel for ecco-v4-py (setup.py) ... done<br>
Stored in directory:
/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-ephem-wheel-cache-dujj8zwc/wheels/25/44/09/2c5d87a0317c8e1729b779d6d91a80602adf04c8508187cb41<br>
Building wheel for pyresample (setup.py) ... error<br>
<font color="#ff0000"> ERROR: Complete output from command
/Users/ddesbruy/anaconda2/envs/pydam36/bin/python -u -c 'import
setuptools,
tokenize;__file__='"'"'/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-install-f3qqrj79/pyresample/setup.py'"'"';f=getattr(tokenize,
'"'"'open'"'"',
open)(__file__);code=f.read().replace('"'"'\r\n'"'"',
'"'"'\n'"'"');f.close();exec(compile(code, __file__,
'"'"'exec'"'"'))' bdist_wheel -d
/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-wheel-xa_1l7dy
--python-tag cp37:<br>
ERROR: Cython will not be used. Use environment variable
'USE_CYTHON=True' to use it<br>
running bdist_wheel<br>
running build<br>
running build_py<br>
creating build<br>
creating build/lib.macosx-10.9-x86_64-3.7<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/boundary.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/grid.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/plot.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/version.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/_spatial_mp.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/area_config.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/spherical_geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/_cartopy.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/_multi_proc.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/kd_tree.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/geo_filter.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/spherical.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/data_reduce.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/image.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_ewa_ll2cr.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_spherical.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_plot.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_utils.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_bilinear.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_ewa_fornav.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_grid.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_kd_tree.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_image.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_swath.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_spatial_mp.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_data_reduce.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_spherical_geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/utils.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/bilinear<br>
copying pyresample/bilinear/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/bilinear<br>
copying pyresample/bilinear/xarr.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/bilinear<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
copying pyresample/utils/_rasterio.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
copying pyresample/utils/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
copying pyresample/utils/_proj4.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa<br>
copying pyresample/ewa/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa<br>
running build_ext<br>
building 'pyresample.ewa._ll2cr' extension<br>
creating build/temp.macosx-10.9-x86_64-3.7<br>
creating build/temp.macosx-10.9-x86_64-3.7/pyresample<br>
creating build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa<br>
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O3 -Wall
-Wstrict-prototypes -march=core2 -mtune=haswell -mssse3
-ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe
-D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9
-I/Users/ddesbruy/anaconda2/envs/pydam36/include/python3.7m
-I/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include
-c pyresample/ewa/_ll2cr.c -o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_ll2cr.o -O3
-Wno-unused-function<br>
In file included from pyresample/ewa/_ll2cr.c:611:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:<br>
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: "Using deprecated NumPy API, disable it with "
"#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
[-W#warnings]<br>
#warning "Using deprecated NumPy API, disable it with " \<br>
^<br>
1 warning generated.<br>
x86_64-apple-darwin13.4.0-clang -bundle -undefined
dynamic_lookup -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -flto
-Wl,-export_dynamic -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -Wl,-pie
-Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs
-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE
-fstack-protector-strong -O2 -pipe -D_FORTIFY_SOURCE=2
-mmacosx-version-min=10.9 -arch x86_64
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_ll2cr.o -o
build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa/_ll2cr.cpython-37m-darwin.so<br>
ld: warning: directory not found for option '-L/opt/local/lib'<br>
ld: warning: directory not found for option
'-L/opt/local/lib/perl5/5.18/darwin-thread-multi-2level/File'<br>
ld: warning: directory not found for option
'-L/opt/local/lib/perl5/5.18'<br>
ld: warning: -pie being ignored. It is only used when linking
a main executable<br>
ld: warning: ignoring file
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd,
file was built for unsupported file format ( 0x2D 0x2D 0x2D 0x20
0x21 0x74 0x61 0x70 0x69 0x2D 0x74 0x62 0x64 0x2D 0x76 0x33 )
which is not the architecture being linked (x86_64):
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd<br>
building 'pyresample.ewa._fornav' extension<br>
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O3 -Wall
-Wstrict-prototypes -march=core2 -mtune=haswell -mssse3
-ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe
-D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9
-I/Users/ddesbruy/anaconda2/envs/pydam36/include/python3.7m
-I/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include
-c pyresample/ewa/_fornav.cpp -o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav.o -O3
-Wno-unused-function<br>
In file included from pyresample/ewa/_fornav.cpp:631:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:<br>
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: "Using deprecated NumPy API, disable it with "
"#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
[-W#warnings]<br>
#warning "Using deprecated NumPy API, disable it with " \<br>
^<br>
1 warning generated.<br>
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O3 -Wall
-Wstrict-prototypes -march=core2 -mtune=haswell -mssse3
-ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe
-D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9
-I/Users/ddesbruy/anaconda2/envs/pydam36/include/python3.7m
-I/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include
-c pyresample/ewa/_fornav_templates.cpp -o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav_templates.o
-O3 -Wno-unused-function<br>
In file included from pyresample/ewa/_fornav_templates.cpp:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:<br>
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: "Using deprecated NumPy API, disable it with "
"#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
[-W#warnings]<br>
#warning "Using deprecated NumPy API, disable it with " \<br>
^<br>
1 warning generated.<br>
x86_64-apple-darwin13.4.0-clang++ -bundle -undefined
dynamic_lookup -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -flto
-Wl,-export_dynamic -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -Wl,-pie
-Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs
-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE
-fstack-protector-strong -O2 -pipe -D_FORTIFY_SOURCE=2
-mmacosx-version-min=10.9 -arch x86_64
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav.o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav_templates.o
-o
build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav.cpython-37m-darwin.so<br>
unable to execute 'x86_64-apple-darwin13.4.0-clang++': No such
file or directory<br>
error: command 'x86_64-apple-darwin13.4.0-clang++' failed with
exit status 1<br>
----------------------------------------<br>
ERROR: Failed building wheel for pyresample</font><br>
Running setup.py clean for pyresample<br>
Successfully built ecco-v4-py<br>
Failed to build pyresample<br>
Installing collected packages: pyresample, ecco-v4-py<br>
Running setup.py install for pyresample ... error<br>
<font color="#ff0000"> ERROR: Complete output from command
/Users/ddesbruy/anaconda2/envs/pydam36/bin/python -u -c 'import
setuptools,
tokenize;__file__='"'"'/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-install-f3qqrj79/pyresample/setup.py'"'"';f=getattr(tokenize,
'"'"'open'"'"',
open)(__file__);code=f.read().replace('"'"'\r\n'"'"',
'"'"'\n'"'"');f.close();exec(compile(code, __file__,
'"'"'exec'"'"'))' install --record
/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-record-8i3k0ijm/install-record.txt
--single-version-externally-managed --compile:<br>
ERROR: Cython will not be used. Use environment variable
'USE_CYTHON=True' to use it<br>
running install<br>
running build<br>
running build_py<br>
creating build<br>
creating build/lib.macosx-10.9-x86_64-3.7<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/boundary.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/grid.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/plot.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/version.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/_spatial_mp.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/area_config.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/spherical_geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/_cartopy.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/_multi_proc.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/kd_tree.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/geo_filter.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/spherical.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/data_reduce.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
copying pyresample/image.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_ewa_ll2cr.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_spherical.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_plot.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_utils.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_bilinear.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_ewa_fornav.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_grid.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_kd_tree.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_image.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_swath.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_spatial_mp.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_data_reduce.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_spherical_geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/utils.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
copying pyresample/test/test_geometry.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/test<br>
creating
build/lib.macosx-10.9-x86_64-3.7/pyresample/bilinear<br>
copying pyresample/bilinear/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/bilinear<br>
copying pyresample/bilinear/xarr.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/bilinear<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
copying pyresample/utils/_rasterio.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
copying pyresample/utils/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
copying pyresample/utils/_proj4.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/utils<br>
creating build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa<br>
copying pyresample/ewa/__init__.py ->
build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa<br>
running build_ext<br>
building 'pyresample.ewa._ll2cr' extension<br>
creating build/temp.macosx-10.9-x86_64-3.7<br>
creating build/temp.macosx-10.9-x86_64-3.7/pyresample<br>
creating build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa<br>
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O3 -Wall
-Wstrict-prototypes -march=core2 -mtune=haswell -mssse3
-ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe
-D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9
-I/Users/ddesbruy/anaconda2/envs/pydam36/include/python3.7m
-I/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include
-c pyresample/ewa/_ll2cr.c -o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_ll2cr.o -O3
-Wno-unused-function<br>
In file included from pyresample/ewa/_ll2cr.c:611:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:<br>
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: "Using deprecated NumPy API, disable it with "
"#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
[-W#warnings]<br>
#warning "Using deprecated NumPy API, disable it with " \<br>
^<br>
1 warning generated.<br>
x86_64-apple-darwin13.4.0-clang -bundle -undefined
dynamic_lookup -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -flto
-Wl,-export_dynamic -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -Wl,-pie
-Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs
-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE
-fstack-protector-strong -O2 -pipe -D_FORTIFY_SOURCE=2
-mmacosx-version-min=10.9 -arch x86_64
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_ll2cr.o -o
build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa/_ll2cr.cpython-37m-darwin.so<br>
ld: warning: directory not found for option
'-L/opt/local/lib'<br>
ld: warning: directory not found for option
'-L/opt/local/lib/perl5/5.18/darwin-thread-multi-2level/File'<br>
ld: warning: directory not found for option
'-L/opt/local/lib/perl5/5.18'<br>
ld: warning: -pie being ignored. It is only used when
linking a main executable<br>
ld: warning: ignoring file
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd,
file was built for unsupported file format ( 0x2D 0x2D 0x2D 0x20
0x21 0x74 0x61 0x70 0x69 0x2D 0x74 0x62 0x64 0x2D 0x76 0x33 )
which is not the architecture being linked (x86_64):
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk/usr/lib/libSystem.tbd<br>
building 'pyresample.ewa._fornav' extension<br>
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O3 -Wall
-Wstrict-prototypes -march=core2 -mtune=haswell -mssse3
-ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe
-D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9
-I/Users/ddesbruy/anaconda2/envs/pydam36/include/python3.7m
-I/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include
-c pyresample/ewa/_fornav.cpp -o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav.o -O3
-Wno-unused-function<br>
In file included from pyresample/ewa/_fornav.cpp:631:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:<br>
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: "Using deprecated NumPy API, disable it with "
"#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
[-W#warnings]<br>
#warning "Using deprecated NumPy API, disable it with " \<br>
^<br>
1 warning generated.<br>
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O3 -Wall
-Wstrict-prototypes -march=core2 -mtune=haswell -mssse3
-ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe
-D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9
-I/Users/ddesbruy/anaconda2/envs/pydam36/include/python3.7m
-I/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include
-c pyresample/ewa/_fornav_templates.cpp -o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav_templates.o
-O3 -Wno-unused-function<br>
In file included from
pyresample/ewa/_fornav_templates.cpp:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:<br>
In file included from
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:<br>
/Users/ddesbruy/anaconda2/envs/pydam36/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: "Using deprecated NumPy API, disable it with "
"#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
[-W#warnings]<br>
#warning "Using deprecated NumPy API, disable it with " \<br>
^<br>
1 warning generated.<br>
x86_64-apple-darwin13.4.0-clang++ -bundle -undefined
dynamic_lookup -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -flto
-Wl,-export_dynamic -Wl,-pie -Wl,-headerpad_max_install_names
-Wl,-dead_strip_dylibs
-Wl,-rpath,/Users/ddesbruy/anaconda2/envs/pydam36/lib
-L/Users/ddesbruy/anaconda2/envs/pydam36/lib -Wl,-pie
-Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs
-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE
-fstack-protector-strong -O2 -pipe -D_FORTIFY_SOURCE=2
-mmacosx-version-min=10.9 -arch x86_64
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav.o
build/temp.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav_templates.o
-o
build/lib.macosx-10.9-x86_64-3.7/pyresample/ewa/_fornav.cpython-37m-darwin.so<br>
unable to execute 'x86_64-apple-darwin13.4.0-clang++': No
such file or directory<br>
error: command 'x86_64-apple-darwin13.4.0-clang++' failed
with exit status 1<br>
----------------------------------------<br>
ERROR: Command
"/Users/ddesbruy/anaconda2/envs/pydam36/bin/python -u -c 'import
setuptools,
tokenize;__file__='"'"'/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-install-f3qqrj79/pyresample/setup.py'"'"';f=getattr(tokenize,
'"'"'open'"'"',
open)(__file__);code=f.read().replace('"'"'\r\n'"'"',
'"'"'\n'"'"');f.close();exec(compile(code, __file__,
'"'"'exec'"'"'))' install --record
/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-record-8i3k0ijm/install-record.txt
--single-version-externally-managed --compile" failed with error
code 1 in
/private/var/folders/ty/lmm2w9f12yg_v5jwmgyjqdsw00g9t7/T/pip-install-f3qqrj79/pyresample/</font><br>
</p>
<pre class="moz-signature" cols="72">--
-------------------------------------------------------
Damien Desbruyères
Email: <a class="moz-txt-link-abbreviated" href="mailto:damien.desbruyeres@ifremer.fr">damien.desbruyeres@ifremer.fr</a>
Phone: +33 (0)2 29 00 85 05
Laboratoire d'Océanographie Physique et Spatiale (LOPS)
IFREMER
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané
-------------------------------------------------------</pre>
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